Pha-MIR167e

Basic info.

• miRNA locus ID
• Pha-MIR167e

• miRNA locus accession
• PmiREN016216

• Organism
• Panicum hallii

• Genomic location
• Pha-Chr02  3243358  3243488  -

• Comments
• A member of family MIR167

• Confidence level
• 

Secondary strurture and sequence

  TTG        TC   G  C         -C            -  AGTGT     T     AC  CAG
     GTGCATCC  TAG AG TGAAGCTGC  AGCATGATCTGA CG     TTAGC AGTTG  CA   
     ||||||||  ||| || |||||||||  |||||||||||| ||     ||||| |||||  ||    
     CACGTGGG  ATC TC ACTTTGACG  TCGTACTAGACT GC     AATCG TCAGT  GT   
GACGA        TA   G  T         TT            A  -----     -     -A  AAA

• Get mature sequence
• Get star sequence
• Get miRNA stem-loop seqence
• Get miRNA stem-loop ± 20bp
• Get dot-bracket miRNA secondary structure
• Get miRNA stem-loop ± 500bp
• Get miRNA Promoter

miRNA cluster info.

• Cluster ID: 
• Chromosome: 
• Cluster start: 
• Cluster end: 

miRNA syntenic block

Expression info.

Mature miRNA expression [+]

star miRNA expression [+]

Target gene info.[+]

Link

• No link
• No link

Reference

• No reference