Pha-MIR169d

Basic info.

Secondary strurture and sequence

mature sequence    star sequence
5'



3'
                  A A  C          -           -----A  CACCAGGC
    GGGTAGAGAGTGGG G TG AGCCAAGGAT GACTTGCCGGC      GC        
    |||||||||||||| | || |||||||||| |||||||||||      ||         
    TCCGTCTCTCATTC C AC TCGGTTCCTG CTGAACGGCCG      CG        
ACTA              - -  A          T           ACTCTA  AACAGCTG

miRNA cluster info.

No miRNA locus in ± 10k bp interval.

miRNA syntenic block

No syntenic block.

Expression info.

Mature miRNA expression [+]

Reads per million (RPM)

star miRNA expression [+]

Reads per million (RPM)

Target gene info.[+]

Target gene ID psRNAtarget RNAhybrid PARE-Seq?

The first number (from 0-2) indicates the category of CleaveLand4 analysis result while the number in brackets displays the number of degradome libraries which verify the miRNA-target interaction. Click the number to download the selected figure of PARE-Seq reads distribution.

PhHAL.2G429900.1 1.5 NA NA
PhHAL.1G195100.1 2.0 NA NA
PhHAL.2G029100.1 2.0 NA NA
PhHAL.2G134700.1 2.0 NA NA
PhHAL.9G445600.1 2.0 NA NA
PhHAL.9G594500.1 2.0 NA NA

Mature miRNA conservation

?

Mature miRNA conservation

    Link

    Reference