Pha-MIR169f

Basic info.

Secondary strurture and sequence

mature sequence    star sequence
5'



3'
 GCGTGCAACAGC   -T          A            T  -----AG   G          ---   AG
             GCA  CGCGTAGCCA GGATGACTTGCC GC       CTC ATCTTTGGAT   CGG  
             |||  |||||||||| |||||||||||| ||       ||| ||||||||||   |||   
             CGT  GCGCATCGGT TCTACTGAACGG CG       GAG TAGAGGTCTG   GTC  
TACTCTCCTCCTC   TT          G            C  AGGGAGA   G          AAC   CA

miRNA cluster info.

No miRNA locus in ± 10k bp interval.

miRNA syntenic block

No syntenic block.

Expression info.

Mature miRNA expression [+]

Reads per million (RPM)

star miRNA expression [+]

Reads per million (RPM)

Target gene info.[+]

Target gene ID psRNAtarget RNAhybrid PARE-Seq?

The first number (from 0-2) indicates the category of CleaveLand4 analysis result while the number in brackets displays the number of degradome libraries which verify the miRNA-target interaction. Click the number to download the selected figure of PARE-Seq reads distribution.

PhHAL.1G409700.1 2.0 1 NA
PhHAL.2G429900.1 2.0 NA NA
PhHAL.3G474700.1 2.0 NA NA
PhHAL.9G147500.1 2.0 NA NA
PhHAL.9G445600.1 2.0 NA NA
PhHAL.9G594500.1 2.0 NA NA

Mature miRNA conservation

?

Mature miRNA conservation

    Link

    Reference