Pha-MIR393b

Basic info.

Secondary strurture and sequence

mature sequence    star sequence
5'



3'
  TCAGGAAGCT         C           C          CACCA   GCC  -   C  C GCA
            AGTGGAGGA TCCAAAGGGAT GCATTGATCT     TCC   GC CGC GC G   
            ||||||||| ||||||||||| ||||||||||     |||   || ||| || |   C
            TCACCTTTT AGGTTTCCCTA CGTGACTAGA     AGG   CG GCG CG C   
CTGCCTCCGCGT         A           A          ---AC   -AA  C   T  A ACG

miRNA cluster info.

No miRNA locus in ± 10k bp interval.

miRNA syntenic block

No syntenic block.

Expression info.

Mature miRNA expression [+]

Reads per million (RPM)

star miRNA expression [+]

Reads per million (RPM)

Target gene info.[+]

Target gene ID psRNAtarget RNAhybrid PARE-Seq?

The first number (from 0-2) indicates the category of CleaveLand4 analysis result while the number in brackets displays the number of degradome libraries which verify the miRNA-target interaction. Click the number to download the selected figure of PARE-Seq reads distribution.

PhHAL.3G113500.1 1.0 NA NA
PhHAL.7G120400.1 1.0 NA NA

Mature miRNA conservation

?

Mature miRNA conservation

    Link

    Reference