Pha-MIR399c

Basic info.

Secondary strurture and sequence

mature sequence    star sequence
5'



3'
TCCT     --    A   T      TT      C         --------      -T  -GA    G
    AAGCT  GTCC GTT CAGGGC  CTCTTT TTGGCAGGG        AGAGCA  GT   AGCT 
    |||||  |||| ||| ||||||  |||||| |||||||||        ||||||  ||   |||| T
    TTCGA  CAGG CAA GTCCCG  GAGAGG AACCGTCTC        TCTCGT  CG   TCGG 
GGAA     CC    A   T      TT      A         GCAACTTG      CT  ATG    A

miRNA cluster info.

No miRNA locus in ± 10k bp interval.

miRNA syntenic block

No syntenic block.

Expression info.

Mature miRNA expression [+]

Reads per million (RPM)

star miRNA expression [+]

Reads per million (RPM)

Target gene info.[+]

Target gene ID psRNAtarget RNAhybrid PARE-Seq?

The first number (from 0-2) indicates the category of CleaveLand4 analysis result while the number in brackets displays the number of degradome libraries which verify the miRNA-target interaction. Click the number to download the selected figure of PARE-Seq reads distribution.

PhHAL.3G174900.1 1.5 NA NA

Mature miRNA conservation

?

Mature miRNA conservation

    Link

    Reference