Pha-MIR535

Basic info.

• miRNA locus ID
• Pha-MIR535

• miRNA locus accession
• PmiREN016265

• Organism
• Panicum hallii

• Genomic location
• Pha-Chr08  26382677  26382802  +

• Comments
• A member of family MIR535

• Confidence level
• 

Secondary strurture and sequence

  A  T     C  ACC             A   A        C      G         A ATG
   GT TGGTG TG   GGCGGTGACAACG GAG GAGCACGC GGTGCG CCGTCACGG G   
   || ||||| ||   ||||||||||||| ||| |||||||| |||||| ||||||||| |    
   TA ACCAT AC   CTGTCACTGTTGC CTC CTCGTGCG TCATGC GGCGGTGCC C   
TCA  T     C  ACC             C   C        T      -         - GGT

• Get mature sequence
• Get star sequence
• Get miRNA stem-loop seqence
• Get miRNA stem-loop ± 20bp
• Get dot-bracket miRNA secondary structure
• Get miRNA stem-loop ± 500bp
• Get miRNA Promoter

miRNA cluster info.

• Cluster ID: 
• Chromosome: 
• Cluster start: 
• Cluster end: 

miRNA syntenic block

Expression info.

Mature miRNA expression [+]

star miRNA expression [+]

Target gene info.[+]

Link

• No link
• No link

Reference

• No reference