Pvi-MIR162b

Basic info.

• miRNA locus ID
• Pvi-MIR162b

• miRNA locus accession
• PmiREN016314

• Organism
• Panicum virgatum

• Genomic location
• Pvi-Chr01N  73283882  73284049  +

• Comments
• A member of family MIR162

• Confidence level
• 

Secondary strurture and sequence

  TTCATCTAC     - T  C    C    T            CC     T  C    ------ACA     -ATCC       G GGT
           AGGTG G GC TGGG GCAG GGTTTATCGATC  TTCCT GC TTGT         TGCTG     GGGAGCG T   
           ||||| | || |||| |||| ||||||||||||  ||||| || ||||         |||||     ||||||| |    
           TCCAC C CG ACCT CGTC CCAAATAGCTGG  AAGGG CG AACA         ACGAC     TCTTTGT A   
TCGTCCCTGGC     T T  -    A    T            CT     -  C    GACGTTTCG     GTTGT       G ACT

• Get mature sequence
• Get star sequence
• Get miRNA stem-loop seqence
• Get miRNA stem-loop ± 20bp
• Get dot-bracket miRNA secondary structure
• Get miRNA stem-loop ± 500bp
• Get miRNA Promoter

miRNA cluster info.

• Cluster ID: 
• Chromosome: 
• Cluster start: 
• Cluster end: 

miRNA syntenic block

Expression info.

Mature miRNA expression [+]

star miRNA expression [+]

Target gene info.[+]

Link

• No link
• No link

Reference

• No reference