Pvi-MIR167g

Basic info.

Secondary strurture and sequence

mature sequence    star sequence
5'



3'
 AGCG    -     A   T           C              G ATGA   GCTT  A    GA     --      --   - CG
     GTGC TCCAC AGT GGTGAAGCTGC AGCATGATCTGATG T    TAT    TT CCTC  TCTCC  TCCTGA  TCG C  
     |||| ||||| ||| ||||||||||| |||||||||||||| |    |||    || ||||  |||||  ||||||  ||| |   
     CACG GGGTG TCG CTACTTTGATG TCGTACTGGACTGC A    ATA    AA GGAG  AGGGG  AGGACT  AGC G  
AGCAA    T     G   T           -              G ----   --AT  -    AA     AT      TA   A GA

miRNA cluster info.

No miRNA locus in ± 10k bp interval.

miRNA syntenic block

No syntenic block.

Expression info.

Mature miRNA expression [+]

Reads per million (RPM)

star miRNA expression [+]

Reads per million (RPM)

Target gene info.[+]

Target gene ID psRNAtarget RNAhybrid PARE-Seq?

The first number (from 0-2) indicates the category of CleaveLand4 analysis result while the number in brackets displays the number of degradome libraries which verify the miRNA-target interaction. Click the number to download the selected figure of PARE-Seq reads distribution.

Pavir.4NG178100.1 2.0 NA NA
Pavir.9NG197900.1 2.0 2 NA

Mature miRNA conservation

?

Mature miRNA conservation

    Link

    Reference