Pvi-MIR167l

Basic info.

Secondary strurture and sequence

mature sequence    star sequence
5'



3'
   C     A  -      A           C  C        AAA   GAC  GTTCG     AT  T    GGA
 GT TGTGC GC ACAAGA GATGAAGCTGC AG ATGATCTG   GCC   GC     TCCTG  CG GTCT   
 || ||||| || |||||| ||||||||||| || ||||||||   |||   ||     |||||  || ||||    
 CA ACACG CG TGTTCT TTACTTTGACG TC TACTAGAC   CGG   CG     AGGGC  GT CAGG   
A  C     G  G      C           A  -        CAG   --A  -ACAA     AC  -    GAG

miRNA cluster info.

No miRNA locus in ± 10k bp interval.

miRNA syntenic block

No syntenic block.

Expression info.

Mature miRNA expression [+]

Reads per million (RPM)

star miRNA expression [+]

Reads per million (RPM)

Target gene info.[+]

Target gene ID psRNAtarget RNAhybrid PARE-Seq?

The first number (from 0-2) indicates the category of CleaveLand4 analysis result while the number in brackets displays the number of degradome libraries which verify the miRNA-target interaction. Click the number to download the selected figure of PARE-Seq reads distribution.

Pavir.4NG178100.1 2.0 NA NA
Pavir.9NG197900.1 2.0 2 NA

Mature miRNA conservation

?

Mature miRNA conservation

    Link

    Reference