Pvi-MIR319c

Basic info.

Secondary strurture and sequence

mature sequence    star sequence
5'



3'
       C         --CA      G   AC       T   C         ---   ATGG
 AATGGC GTAGGGTTT    TTAGCT CCG  TCATCCA TCA CTACCAAGA   TCC    
 |||||| |||||||||    |||||| |||  ||||||| ||| |||||||||   |||     
 TTGTCG CATCTCGAA    AATCGA GGC  GGTAGGT AGT GATGGTTCT   AGG    
T      -         CTAA      G   GC       T   C         GTA   CGCA

miRNA cluster info.

No miRNA locus in ± 10k bp interval.

miRNA syntenic block

No syntenic block.

Expression info.

Mature miRNA expression [+]

Reads per million (RPM)

star miRNA expression [+]

Reads per million (RPM)

Target gene info.[+]

Target gene ID psRNAtarget RNAhybrid PARE-Seq?

The first number (from 0-2) indicates the category of CleaveLand4 analysis result while the number in brackets displays the number of degradome libraries which verify the miRNA-target interaction. Click the number to download the selected figure of PARE-Seq reads distribution.

Pavir.4NG143700.1 1.5 NA NA

Mature miRNA conservation

?

Mature miRNA conservation

    Link

    Reference