Pvi-MIR390b

Basic info.

Secondary strurture and sequence

mature sequence    star sequence
5'



3'
    GAAT    CCT  AA      --    G   AA   T    ---    GA  CT
        AGTC   GT  GGTGGT  TATT CTC  TTG AGCT   CAAG  GG  
        ||||   ||  ||||||  |||| |||  ||| ||||   ||||  ||   
        TTAG   CA  CTACCG  ATAG GAG  GAC TCGA   GTTC  CC  
AAGTGCGT    --C  AC      CG    G   --   -    ACC    AA  CT

miRNA cluster info.

No miRNA locus in ± 10k bp interval.

miRNA syntenic block

No syntenic block.

Expression info.

Mature miRNA expression [+]

Reads per million (RPM)

star miRNA expression [+]

Reads per million (RPM)

Target gene info.[+]

Target gene ID psRNAtarget RNAhybrid PARE-Seq?

The first number (from 0-2) indicates the category of CleaveLand4 analysis result while the number in brackets displays the number of degradome libraries which verify the miRNA-target interaction. Click the number to download the selected figure of PARE-Seq reads distribution.

Pavir.7KG262500.1 0.0 NA NA
Pavir.7KG265300.1 0.0 NA NA
Pavir.7NG331300.1 0.5 NA NA

Mature miRNA conservation

?

Mature miRNA conservation

    Link

    Reference