Pvi-MIR393d

Basic info.

Secondary strurture and sequence

mature sequence    star sequence
5'



3'
   CTC   AA  T         C           C          ---   TCGCTGCTCACCATCCGCCGCCG
      AGG  GC AGTGGAGGA TCCAAAGGGAT GCATTGATCT   AGC                       
      |||  || ||||||||| ||||||||||| ||||||||||   |||                        
      TCC  CG TCACCTTTT AGGTTTCCCTA CGTGACTAGA   GGA                       
CACGCC   -G  T         A           A          ACA   GCGCGCGCCGCGGCCGTACGGCC

miRNA cluster info.

No miRNA locus in ± 10k bp interval.

miRNA syntenic block

No syntenic block.

Expression info.

Mature miRNA expression [+]

Reads per million (RPM)

star miRNA expression [+]

Reads per million (RPM)

Target gene info.[+]

Target gene ID psRNAtarget RNAhybrid PARE-Seq?

The first number (from 0-2) indicates the category of CleaveLand4 analysis result while the number in brackets displays the number of degradome libraries which verify the miRNA-target interaction. Click the number to download the selected figure of PARE-Seq reads distribution.

Pavir.3KG150200.1 1.0 NA NA
Pavir.3KG361100.1 1.0 NA NA
Pavir.7NG142100.1 1.0 NA NA
Pavir.7NG143000.1 1.0 1 NA
Pavir.9NG624600.1 1.0 NA NA

Mature miRNA conservation

?

Mature miRNA conservation

    Link

    Reference