Pvi-MIR528a

Basic info.

Secondary strurture and sequence

mature sequence    star sequence
5'



3'
TC    T     --        ---           T   G     CA  ACCTCCGGTTGGAAGCCGAC
  AGGC GCAGC  AGCAGCAG   TGGAAGGGGCA GCA AGGAG  GG                    
  |||| |||||  ||||||||   ||||||||||| ||| |||||  ||                    C
  TTTG TGTCG  TCGTCGTC   ACCTTCTCCGT CGT TCCTC  CG                    
      -     CA        CTT           C   G     -T  CTCGCTCCCATCGTGTGTGT

miRNA cluster info.

No miRNA locus in ± 10k bp interval.

miRNA syntenic block

No syntenic block.

Expression info.

Mature miRNA expression [+]

Reads per million (RPM)

star miRNA expression [+]

Reads per million (RPM)

Target gene info.[+]

Target gene ID psRNAtarget RNAhybrid PARE-Seq?

The first number (from 0-2) indicates the category of CleaveLand4 analysis result while the number in brackets displays the number of degradome libraries which verify the miRNA-target interaction. Click the number to download the selected figure of PARE-Seq reads distribution.

Pavir.9KG551200.1 0.0 0 NA
Pavir.9NG759800.1 0.0 0 NA
Pavir.2NG336500.1 2.0 NA NA

Mature miRNA conservation

?

Mature miRNA conservation

    Link

    Reference