Pvi-MIR528b

Basic info.

Secondary strurture and sequence

mature sequence    star sequence
5'



3'
   TC    T          C             T   G    --  -   AGGTTTGGTTGGAAGC
     TGGC GTAGCAGCAG AGTGGAAGGGGCA GCA AGGA  GC AGG                
     |||| |||||||||| ||||||||||||| ||| ||||  || |||                C
     ATCG CATTGTCGTC TTACCTTCTCCGT CGT TCCT  CG TGG                
TTTTT    -          C             C   G    CT  T   CTCCCATCGCGTCCAG

miRNA cluster info.

No miRNA locus in ± 10k bp interval.

miRNA syntenic block

No syntenic block.

Expression info.

Mature miRNA expression [+]

Reads per million (RPM)

star miRNA expression [+]

Reads per million (RPM)

Target gene info.[+]

Target gene ID psRNAtarget RNAhybrid PARE-Seq?

The first number (from 0-2) indicates the category of CleaveLand4 analysis result while the number in brackets displays the number of degradome libraries which verify the miRNA-target interaction. Click the number to download the selected figure of PARE-Seq reads distribution.

Pavir.9KG551200.1 0.0 0 NA
Pavir.9NG759800.1 0.0 0 NA
Pavir.2NG336500.1 2.0 NA NA

Mature miRNA conservation

?

Mature miRNA conservation

    Link

    Reference