Pvi-MIR535a

Basic info.

• miRNA locus ID
• Pvi-MIR535a

• miRNA locus accession
• PmiREN016441

• Organism
• Panicum virgatum

• Genomic location
• Pvi-Chr08K  44720214  44720339  -

• Comments
• A member of family MIR535

• Confidence level
• 

Secondary strurture and sequence

  AGTTTGGTGCTGACC             A   A      --------    G    TTC      GA
                 GACGGTGACAACG GAG GAGCAC        GCCG TGCG   GTCACA  
                 ||||||||||||| ||| ||||||        |||| ||||   ||||||   
                 CTGTCACTGTTGC CTC CTCGTG        CGGC GCGC   CGGTGT  
TTCATGTACCATCACCC             C   C      CGTTCATA    G    --C      AG

• Get mature sequence
• Get star sequence
• Get miRNA stem-loop seqence
• Get miRNA stem-loop ± 20bp
• Get dot-bracket miRNA secondary structure
• Get miRNA stem-loop ± 500bp
• Get miRNA Promoter

miRNA cluster info.

• Cluster ID: 
• Chromosome: 
• Cluster start: 
• Cluster end: 

miRNA syntenic block

Expression info.

Mature miRNA expression [+]

star miRNA expression [+]

Target gene info.[+]

Link

• No link
• No link

Reference

• No reference