Pvi-MIRN2531

Basic info.

• miRNA locus ID
• Pvi-MIRN2531

• miRNA locus accession
• PmiREN016458

• Organism
• Panicum virgatum

• Genomic location
• Pvi-Chr03N  4675324  4675461  -

• Comments
• A member of family MIRN2531

• Confidence level
• 

Secondary strurture and sequence

      AT      CC   T   C        A     A      T   -      A   G       -     GC
     G  GAAGAG  TTA CTC CTTAGCCA GAATG CTTGCC ATC TCTACT TTT GTCCATC TGGGA  
     |  ||||||  ||| ||| |||||||| ||||| |||||| ||| |||||| ||| ||||||| |||||   
     C  CTTCTC  AGT GAG GAATTGGT CTTAC GAACGG TAG AGGTGG AAA TAGGTAG ATTCT  
TACCA --      TT   -   C        -     -      -   T      -   G       T     TC

• Get mature sequence
• Get star sequence
• Get miRNA stem-loop seqence
• Get miRNA stem-loop ± 20bp
• Get dot-bracket miRNA secondary structure
• Get miRNA stem-loop ± 500bp
• Get miRNA Promoter

miRNA cluster info.

• Cluster ID: 
• Chromosome: 
• Cluster start: 
• Cluster end: 

miRNA syntenic block

Expression info.

Mature miRNA expression [+]

star miRNA expression [+]

Target gene info.[+]

Link

• No link
• No link

Reference

• No reference