Sit-MIR156c

Basic info.

Secondary strurture and sequence

mature sequence    star sequence
5'



3'
  CGGAGAGGCTCC      A         -   -       ACACG         --        GC
              GGAGAG TTGACAGAA GAG AGTGAGC     GCGCGATGA  ACAGCATA  
              |||||| ||||||||| ||| |||||||     |||||||||  ||||||||  G
              CCTCTC GACTGTCTT CTC TCACTCG     TGCGCTGCT  TGTCGTGT  
TCAGGAGTTCTTTA      C         T   C       -----         CC        GT

miRNA cluster info.

No miRNA locus in ± 10k bp interval.

miRNA syntenic block

No syntenic block.

Expression info.

Mature miRNA expression [+]

Reads per million (RPM)

star miRNA expression [+]

Reads per million (RPM)

Target gene info.[+]

Target gene ID psRNAtarget RNAhybrid PARE-Seq?

The first number (from 0-2) indicates the category of CleaveLand4 analysis result while the number in brackets displays the number of degradome libraries which verify the miRNA-target interaction. Click the number to download the selected figure of PARE-Seq reads distribution.

Seita.1G069300.1 1.0 1 NA
Seita.1G091900.1 1.0 NA NA
Seita.2G254300.1 1.0 NA NA
Seita.2G266500.1 1.0 NA NA
Seita.2G324900.1 1.0 1 NA
Seita.2G325000.1 1.0 1 NA
Seita.4G270400.1 1.0 NA NA
Seita.5G432500.1 1.0 NA NA
Seita.6G205500.1 1.0 NA NA
Seita.6G223300.1 1.0 NA NA
Seita.7G190000.1 1.0 NA NA

Mature miRNA conservation

?

Mature miRNA conservation

    Link

    Reference