Sit-MIR156e

Basic info.

Secondary strurture and sequence

mature sequence    star sequence
5'



3'
        G  A     CTCTAG  A        -A    -          --A   -A   CC      - AG
         GG CGGAC      GG GATGACAG  AGAG AGAGAGCACA   CCC  GCA  AGCGAG C  
         || |||||      || ||||||||  |||| ||||||||||   |||  |||  |||||| |  A
         CC GCCTG      CC CTACTGTC  TCTC TCTCTCGTGT   GGG  CGT  TCGCTC G  
ACAACCTCA  G     ------  G        AC    G          GCC   AG   CT      C AA

miRNA cluster info.

No miRNA locus in ± 10k bp interval.

miRNA syntenic block

No syntenic block.

Expression info.

Mature miRNA expression [+]

Reads per million (RPM)

star miRNA expression [+]

Reads per million (RPM)

Target gene info.[+]

Target gene ID psRNAtarget RNAhybrid PARE-Seq?

The first number (from 0-2) indicates the category of CleaveLand4 analysis result while the number in brackets displays the number of degradome libraries which verify the miRNA-target interaction. Click the number to download the selected figure of PARE-Seq reads distribution.

Seita.1G069300.1 0.0 0 NA
Seita.1G091900.1 0.0 NA NA
Seita.2G254300.1 0.0 NA NA
Seita.2G266500.1 0.0 NA NA
Seita.2G324900.1 0.0 0 NA
Seita.2G325000.1 0.0 0 NA
Seita.4G270400.1 0.0 NA NA
Seita.5G432500.1 0.0 NA NA
Seita.6G205500.1 0.0 NA NA
Seita.6G223300.1 0.0 NA NA
Seita.7G190000.1 0.0 NA NA
Seita.8G124900.1 1.5 1 NA
Seita.4G196500.1 2.0 NA NA

Mature miRNA conservation

?

Mature miRNA conservation

    Link

    Reference