Sit-MIR156k

Basic info.

Secondary strurture and sequence

mature sequence    star sequence
5'



3'
CA    T TC  T    ------T         -     -               G   A        A  CAAACCTTTACAA   AGA
  GTGG G  CA GGCT       CCTGACAGA AGAGA GTGAGCACACAGCGG CAG CTGCATCG TC             TCG   
  |||| |  || ||||       ||||||||| ||||| ||||||||||||||| ||| |||||||| ||             |||    
  CGTC C  GT CCGG       GGACTGTCT TCTCT CACTCGTGTGTTGTC GTC GACGTAGT AG             AGC   
      - CT  -    CCTCTAC         C     T               -   -        A  TAAGCATACACAA   AGA

miRNA cluster info.

No miRNA locus in ± 10k bp interval.

miRNA syntenic block

No syntenic block.

Expression info.

Mature miRNA expression [+]

Reads per million (RPM)

star miRNA expression [+]

Reads per million (RPM)

Target gene info.[+]

Target gene ID psRNAtarget RNAhybrid PARE-Seq?

The first number (from 0-2) indicates the category of CleaveLand4 analysis result while the number in brackets displays the number of degradome libraries which verify the miRNA-target interaction. Click the number to download the selected figure of PARE-Seq reads distribution.

Seita.1G069300.1 1.0 1 NA
Seita.1G091900.1 1.0 NA NA
Seita.2G254300.1 1.0 NA NA
Seita.2G266500.1 1.0 NA NA
Seita.2G324900.1 1.0 1 NA
Seita.2G325000.1 1.0 1 NA
Seita.4G270400.1 1.0 NA NA
Seita.5G432500.1 1.0 NA NA
Seita.6G205500.1 1.0 NA NA
Seita.6G223300.1 1.0 NA NA
Seita.7G190000.1 1.0 NA NA

Mature miRNA conservation

?

Mature miRNA conservation

    Link

    Reference