Sit-MIR160b

Basic info.

Secondary strurture and sequence

mature sequence    star sequence
5'



3'
         T  AAAC     AA     C    T  C         C     -        ACCTGGAC    AT     AG
     GAGG GA    TAGGG  TATGC TGGC CC TGTATGCCA TCGCA CGGCTACC        GATC  ATCGG  
     |||| ||    |||||  ||||| |||| || ||||||||| ||||| ||||||||        ||||  |||||   
     CTCT CT    GTCCC  GTACG ACCG GG GCGTGCGGT GGCGT GCCGGTGG        CTAG  TAGTC  
TCTCT    -  -CTC     -G     A    T  A         C     A        --------    -C     CC

miRNA cluster info.

No miRNA locus in ± 10k bp interval.

miRNA syntenic block

No syntenic block.

Expression info.

Mature miRNA expression [+]

Reads per million (RPM)

star miRNA expression [+]

Reads per million (RPM)

Target gene info.[+]

Target gene ID psRNAtarget RNAhybrid PARE-Seq?

The first number (from 0-2) indicates the category of CleaveLand4 analysis result while the number in brackets displays the number of degradome libraries which verify the miRNA-target interaction. Click the number to download the selected figure of PARE-Seq reads distribution.

Seita.4G257800.1 0.0 NA NA
Seita.7G169600.1 0.0 NA NA
Seita.9G219800.1 0.0 NA NA
Seita.3G003300.1 0.5 NA NA
Seita.1G241500.1 1.0 NA NA

Mature miRNA conservation

?

Mature miRNA conservation

    Link

    Reference