Sit-MIR162

Basic info.

Secondary strurture and sequence

mature sequence    star sequence
5'



3'
  TTTATCTACA    - T T     C    T            CC     T  C    G   ATC      --TGG  GT
            GGTG G G CTGGG GCAG GGTTTATCGATC  TTCCT GC TTGT CTG   CGGGAG     TG  
            |||| | | ||||| |||| ||||||||||||  ||||| || |||| |||   ||||||     ||   
            CCAC C C GACCT CGTC CCAAATAGCTGG  AAGGG CG AACA GAC   GTTCTT     AC  
CGGTCCTTGGTA    T T -     A    T            CT     -  C    -   GTT      TGTGA  TT

miRNA cluster info.

No miRNA locus in ± 10k bp interval.

miRNA syntenic block

No syntenic block.

Expression info.

Mature miRNA expression [+]

Reads per million (RPM)

star miRNA expression [+]

Reads per million (RPM)

Target gene info.[+]

Target gene ID psRNAtarget RNAhybrid PARE-Seq?

The first number (from 0-2) indicates the category of CleaveLand4 analysis result while the number in brackets displays the number of degradome libraries which verify the miRNA-target interaction. Click the number to download the selected figure of PARE-Seq reads distribution.

Seita.5G064400.1 2.0 1 NA

Mature miRNA conservation

?

Mature miRNA conservation

    Link

    Reference