Sit-MIR164c

Basic info.

Secondary strurture and sequence

mature sequence    star sequence
5'



3'
   CT           T  C  T        CA             -TAG  A    CC     A        GGACT   GCGCACCTGCGTGTGGCCGGT
     TGGTGAGAAGG CC TG TGGAGAAG  GGGCACGTGCAGG    AG CACG  GGAGC CGGCCGGC     CAC                     
     ||||||||||| || || ||||||||  |||||||||||||    || ||||  ||||| ||||||||     |||                      
     ACCACTCTTCC GG AC ACCTCTTC  CTCGTGCACGTCC    TC GTGT  CCTCG TTCTTCGT     TCG                     
CTCCC           -  T  C        CC             TCGA  -    AA     -        -----   AAGGAGCGAGCGAATGAAAGC

miRNA cluster info.

No miRNA locus in ± 10k bp interval.

miRNA syntenic block

No syntenic block.

Expression info.

Mature miRNA expression [+]

Reads per million (RPM)

star miRNA expression [+]

Reads per million (RPM)

Target gene info.[+]

Target gene ID psRNAtarget RNAhybrid PARE-Seq?

The first number (from 0-2) indicates the category of CleaveLand4 analysis result while the number in brackets displays the number of degradome libraries which verify the miRNA-target interaction. Click the number to download the selected figure of PARE-Seq reads distribution.

Seita.3G386200.1 1.0 NA NA
Seita.4G263400.1 1.0 NA NA
Seita.1G209000.1 1.5 2 NA
Seita.7G124900.1 1.5 2 NA
Seita.6G032700.1 2.0 NA NA

Mature miRNA conservation

?

Mature miRNA conservation

    Link

    Reference