Sit-MIR164d

Basic info.

Secondary strurture and sequence

mature sequence    star sequence
5'



3'
  GGGT             A       A  C             --  ATTCTTTCCTCTC   GGCTTGGCATTCCGGCAGCGCCGCTGCGGGCCGGTTGCCG
      GGCGAGGTGCGCG GGTGGAG AG AGGGCACGTGCAT  GC             GCC                                        
      ||||||||||||| ||||||| || |||||||||||||  ||             |||                                         
      CCGCTCCGCGCGT CCACCTC TC TCCCGTGTACGTA  CG             CGA                                        
ACGAGT             G       C  T             GT  -------------   AGTCCTCGATCGATCGTTCGACCCGATCGGCCGGCCGGTC

miRNA cluster info.

No miRNA locus in ± 10k bp interval.

miRNA syntenic block

No syntenic block.

Expression info.

Mature miRNA expression [+]

Reads per million (RPM)

star miRNA expression [+]

Reads per million (RPM)

Target gene info.[+]

Target gene ID psRNAtarget RNAhybrid PARE-Seq?

The first number (from 0-2) indicates the category of CleaveLand4 analysis result while the number in brackets displays the number of degradome libraries which verify the miRNA-target interaction. Click the number to download the selected figure of PARE-Seq reads distribution.

Seita.3G386200.1 1.0 NA NA
Seita.4G263400.1 1.0 NA NA
Seita.1G209000.1 1.5 2 NA
Seita.7G124900.1 1.5 2 NA
Seita.6G032700.1 2.0 NA NA

Mature miRNA conservation

?

Mature miRNA conservation

Link

Reference