Sit-MIR167b

Basic info.

• miRNA locus ID
• Sit-MIR167b

• miRNA locus accession
• PmiREN018646

• Organism
• Setaria italica

• Genomic location
• Sit-scaffold_2  4311974  4312113  -

• Comments
• A member of family MIR167

• Confidence level
• 

Secondary strurture and sequence

  GTG        T T  G  C         -             -  AGTGT     T    GA  AC  -  GC
     GTGCGTCC C AG AG TGAAGCTGC CAGCATGATCTGA CG     TTAGC AGTT  CG  TA CA  
     |||||||| | || || ||||||||| ||||||||||||| ||     ||||| ||||  ||  || ||   
     CACGTAGG G TC TC ACTTTGACG GTCGTACTAGACT GC     AATCG TCAA  GC  GT GT  
GAAGG        T C  G  T         C             A  -----     -    -A  CA  A  AA

• Get mature sequence
• Get star sequence
• Get miRNA stem-loop seqence
• Get miRNA stem-loop ± 20bp
• Get dot-bracket miRNA secondary structure
• Get miRNA stem-loop ± 500bp
• Get miRNA Promoter

miRNA cluster info.

• Cluster ID: 
• Chromosome: 
• Cluster start: 
• Cluster end: 

miRNA syntenic block

Expression info.

Mature miRNA expression [+]

star miRNA expression [+]

Target gene info.[+]

Link

• No link
• Link To PNDB

Reference

• No reference