Sit-MIR167e

Basic info.

• miRNA locus ID
• Sit-MIR167e

• miRNA locus accession
• PmiREN018649

• Organism
• Setaria italica

• Genomic location
• Sit-scaffold_9  55653029  55653175  -

• Comments
• A member of family MIR167

• Confidence level
• 

Secondary strurture and sequence

   C     A  -      A           C  C        AAA  GGA   G TC   G  ATCA     GGG
 GT TGTGC GC ACAAGA GATGAAGCTGC AG ATGATCTG   GC   CGC T  TTC TG    TGTCT   
 || ||||| || |||||| ||||||||||| || ||||||||   ||   ||| |  ||| ||    |||||    
 CA ACACG CG TGTTCT TTACTTTGACG TC TACTAGAC   CG   GCG A  AAG GC    ACAGG   
C  C     A  G      C           A  -        CAG  -GA   G TA   G  -ACA     AAC

• Get mature sequence
• Get star sequence
• Get miRNA stem-loop seqence
• Get miRNA stem-loop ± 20bp
• Get dot-bracket miRNA secondary structure
• Get miRNA stem-loop ± 500bp
• Get miRNA Promoter

miRNA cluster info.

• Cluster ID: 
• Chromosome: 
• Cluster start: 
• Cluster end: 

miRNA syntenic block

Expression info.

Mature miRNA expression [+]

star miRNA expression [+]

Target gene info.[+]

Link

• No link
• No link

Reference

• No reference