Sit-MIR167f

Basic info.

• miRNA locus ID
• Sit-MIR167f

• miRNA locus accession
• PmiREN018650

• Organism
• Setaria italica

• Genomic location
• Sit-scaffold_1  6699575  6699838  +

• Comments
• A member of family MIR167

• Confidence level
• 

Secondary strurture and sequence

GTTTTGGTGGT     AGAT         C               -        ACAAG      --TTT        -  -  TAT CCGCAATGCGACAGGAGGACTACTCTTGGTGCTAGATGGGGTTGAGTG
           GTGAG    TGAAGCTGC AGCATGATCTGATGA GGACCGAA     CAGAGG     TCAGGGTT TA GG   G                                                
           |||||    ||||||||| ||||||||||||||| ||||||||     ||||||     |||||||| || ||   |                                                 
           CGCTC    ACTTCGACG TTGTACTAGACTACT CCTGGTTT     GTCTTT     GTACGTAC AG GA   T                                                
          T     ----         -               A        -ATAA      GGTAC        G  T  --- TAAGTCTTTGGTACGTATAGTCTTATGGTTCTTAGGAGGAGGTTGATT

• Get mature sequence
• Get star sequence
• Get miRNA stem-loop seqence
• Get miRNA stem-loop ± 20bp
• Get dot-bracket miRNA secondary structure
• Get miRNA stem-loop ± 500bp
• Get miRNA Promoter

miRNA cluster info.

• Cluster ID: 
• Chromosome: 
• Cluster start: 
• Cluster end: 

miRNA syntenic block

Expression info.

Mature miRNA expression [+]

star miRNA expression [+]

Target gene info.[+]

Link

• No link
• No link

Reference

• No reference