Sit-MIR167i

Basic info.

• miRNA locus ID
• Sit-MIR167i

• miRNA locus accession
• PmiREN018653

• Organism
• Setaria italica

• Genomic location
• Sit-scaffold_9  5818377  5818521  +

• Comments
• A member of family MIR167

• Confidence level
• 

Secondary strurture and sequence

 TGA        - A               - -              ----    G      CG AA     G  GT
    GTGCCCAA G GAAAGAGTGAAGCTG C CAGCATGATCTAAC    TTGT TGGGGG  C  GCGGT AG  
    |||||||| | ||||||||||||||| | ||||||||||||||    |||| ||||||  |  ||||| ||   
    CACGGGTT C CTTTCTCACTTTGAC G GTCGTACTAGATTG    AGCG GTTTTT  G  CGCCG TC  
GTTG        T C               A T              TGGT    G      AG AG     -  GT

• Get mature sequence
• Get star sequence
• Get miRNA stem-loop seqence
• Get miRNA stem-loop ± 20bp
• Get dot-bracket miRNA secondary structure
• Get miRNA stem-loop ± 500bp
• Get miRNA Promoter

miRNA cluster info.

• Cluster ID: 
• Chromosome: 
• Cluster start: 
• Cluster end: 

miRNA syntenic block

Expression info.

Mature miRNA expression [+]

star miRNA expression [+]

Target gene info.[+]

Link

• No link
• Link To PNDB

Reference

• No reference