Sit-MIR168

Basic info.

• miRNA locus ID
• Sit-MIR168

• miRNA locus accession
• PmiREN018655

• Organism
• Setaria italica

• Genomic location
• Sit-scaffold_1  8667993  8668101  +

• Comments
• A member of family MIR168

• Confidence level
• 

Secondary strurture and sequence

  GC   C      C   G  C             AT     C   ACG    CGC
    CGC GCGCCG CTC GG TCGCTTGGTGCAG  CGGGA CCG   CCCG   
    ||| |||||| ||| || |||||||||||||  ||||| |||   ||||    
    GCG CGCGGC GAG CT AGTGAACCACGTT  GCCCT GGC   GGGC   
AATA   A      C   G  A             CC     A   -CA    CGC

• Get mature sequence
• Get star sequence
• Get miRNA stem-loop seqence
• Get miRNA stem-loop ± 20bp
• Get dot-bracket miRNA secondary structure
• Get miRNA stem-loop ± 500bp
• Get miRNA Promoter

miRNA cluster info.

• Cluster ID: 
• Chromosome: 
• Cluster start: 
• Cluster end: 

miRNA syntenic block

Expression info.

Mature miRNA expression [+]

star miRNA expression [+]

Target gene info.[+]

Link

• No link
• No link

Reference

• No reference