Sit-MIR169a

Basic info.

Secondary strurture and sequence

mature sequence    star sequence
5'



3'
  A     C             C     A      -          --   CGCCCGCCGGCCGGCAAGCGTGCGTTTCAGAATTCAGAGAGAGTT
   GGAGG GGAGAGCGGAATG AGCCA GGATGA CTTGCCGGAG  CGC                                             
   ||||| ||||||||||||| ||||| |||||| ||||||||||  |||                                             T
   TCTCC CCTCTCGCTTTGC TCGGT CCTGTT GAACGGCCCT  TGG                                             
CAC     T             A     A      T          AG   TTGTGGTTCAGGGGTTGTCTCTCAGTGAGTTGTTTTGTTTCATTG

miRNA cluster info.

No miRNA locus in ± 10k bp interval.

miRNA syntenic block

No syntenic block.

Expression info.

Mature miRNA expression [+]

Reads per million (RPM)

star miRNA expression [+]

Reads per million (RPM)

Target gene info.[+]

Target gene ID psRNAtarget RNAhybrid PARE-Seq?

The first number (from 0-2) indicates the category of CleaveLand4 analysis result while the number in brackets displays the number of degradome libraries which verify the miRNA-target interaction. Click the number to download the selected figure of PARE-Seq reads distribution.

Seita.3G390000.1 1.5 NA NA
Seita.9G155700.1 1.5 NA NA
Seita.1G338100.1 2.0 2 NA
Seita.2G383900.1 2.0 NA NA
Seita.5G055500.1 2.0 NA NA
Seita.5G055600.1 2.0 1 NA
Seita.9G010300.1 2.0 NA NA
Seita.9G367200.1 2.0 NA NA
Seita.9G521100.1 2.0 2 NA

Mature miRNA conservation

?

Mature miRNA conservation

    Link

    Reference