Sit-MIR169f

Basic info.

Secondary strurture and sequence

mature sequence    star sequence
5'



3'
         G     TGTGTTT             ---    T          C AC      T  CC  GAAA
          GAGGT       TGTTGTGTAGCCA   AGGA GACTTGCCGG C  TGTCTC CG  GT    
          |||||       |||||||||||||   |||| |||||||||| |  |||||| ||  ||    C
          CTCCG       ATAGTACATCGGT   TCTT TTGGACGGCC G  ACAGAG GC  CA    
TACTCTTTTG     -------             CGC    T          A CC      T  --  ATTG

miRNA cluster info.

No miRNA locus in ± 10k bp interval.

miRNA syntenic block

No syntenic block.

Expression info.

Mature miRNA expression [+]

Reads per million (RPM)

star miRNA expression [+]

Reads per million (RPM)

Target gene info.[+]

Target gene ID psRNAtarget RNAhybrid PARE-Seq?

The first number (from 0-2) indicates the category of CleaveLand4 analysis result while the number in brackets displays the number of degradome libraries which verify the miRNA-target interaction. Click the number to download the selected figure of PARE-Seq reads distribution.

Seita.5G055500.1 1.0 NA NA
Seita.5G055600.1 1.0 1 NA
Seita.9G010300.1 1.0 NA NA
Seita.1G338100.1 2.0 2 NA
Seita.2G383900.1 2.0 NA NA
Seita.3G390000.1 2.0 NA NA
Seita.9G155700.1 2.0 NA NA
Seita.9G367200.1 2.0 NA NA
Seita.9G521100.1 2.0 2 NA

Mature miRNA conservation

?

Mature miRNA conservation

    Link

    Reference