Sit-MIR169k

Basic info.

Secondary strurture and sequence

mature sequence    star sequence
5'



3'
     AT      C  A    C        A     A      T   -        G        -CA   AG
    G  GAAGAG AT TCTC CTTAGCCA GAATG CTTGCC ATC TCTACTAT TCGTTCAT   GGG  
    |  |||||| || |||| |||||||| ||||| |||||| ||| |||||||| ||||||||   |||   
    C  CTTCTC TA GGAG GAATTGGT CTTAC GGATGG TAG AGGTGGTA AGTAGGTA   CTC  
ACCA --      T  G    T        -     -      -   T        -        ATA   CT

miRNA cluster info.

No miRNA locus in ± 10k bp interval.

miRNA syntenic block

No syntenic block.

Expression info.

Mature miRNA expression [+]

Reads per million (RPM)

star miRNA expression [+]

Reads per million (RPM)

Target gene info.[+]

Target gene ID psRNAtarget RNAhybrid PARE-Seq?

The first number (from 0-2) indicates the category of CleaveLand4 analysis result while the number in brackets displays the number of degradome libraries which verify the miRNA-target interaction. Click the number to download the selected figure of PARE-Seq reads distribution.

Seita.3G390000.1 1.5 NA NA
Seita.9G155700.1 1.5 NA NA
Seita.2G037100.1 2.0 2 NA
Seita.9G129400.1 2.0 NA NA

Mature miRNA conservation

?

Mature miRNA conservation

    Link

    Reference