Sit-MIR393b

Basic info.

Secondary strurture and sequence

mature sequence    star sequence
5'



3'
  AGC    C    T      A                T     A  ATTCCTT    TCTTCCATGGTGGCCG
     AATG CTGG GGAAGC TCCAAAGGGATCGCAT GATCC TC       CCAT                
     |||| |||| |||||| |||||||||||||||| ||||| ||       ||||                T
     TTAC GATC CCTTCG AGGTTTTCCTAGCGTA CTAGG AG       TTGG                
CCTCA    C    T      G                -     C  ----CAG    CACGAAGAACATCTTC

miRNA cluster info.

No miRNA locus in ± 10k bp interval.

miRNA syntenic block

No syntenic block.

Expression info.

Mature miRNA expression [+]

Reads per million (RPM)

star miRNA expression [+]

Reads per million (RPM)

Target gene info.[+]

Target gene ID psRNAtarget RNAhybrid PARE-Seq?

The first number (from 0-2) indicates the category of CleaveLand4 analysis result while the number in brackets displays the number of degradome libraries which verify the miRNA-target interaction. Click the number to download the selected figure of PARE-Seq reads distribution.

Seita.3G037200.1 1.0 NA NA
Seita.7G078300.1 1.0 NA NA
Seita.3G009800.1 2.0 NA NA

Mature miRNA conservation

?

Mature miRNA conservation

    Link

    Reference