Sit-MIR396d

Basic info.

Secondary strurture and sequence

mature sequence    star sequence
5'



3'
 CCA      -        ATC            C           C   AA    GATGCGCCTT
    TGGCCT TCTTTGTG   TTCCACAGCTTT TTGAACTGCAT TGC  AGGA          
    |||||| ||||||||   |||||||||||| ||||||||||| |||  ||||          C
    ACCGGA AGAGACAT   AGGGTGTCGAAA AACTTGACGTG ACG  GGTG          
GTTA      G        CAA            T           C   --    CGTTCATCGT

miRNA cluster info.

No miRNA locus in ± 10k bp interval.

miRNA syntenic block

No syntenic block.

Expression info.

Mature miRNA expression [+]

Reads per million (RPM)

star miRNA expression [+]

Reads per million (RPM)

Target gene info.[+]

Target gene ID psRNAtarget RNAhybrid PARE-Seq?

The first number (from 0-2) indicates the category of CleaveLand4 analysis result while the number in brackets displays the number of degradome libraries which verify the miRNA-target interaction. Click the number to download the selected figure of PARE-Seq reads distribution.

Seita.1G355900.1 0.0 NA NA
Seita.1G355800.1 2.0 1 NA
Seita.4G253200.1 2.0 NA NA

Mature miRNA conservation

?

Mature miRNA conservation

    Link

    Reference