Sit-MIR399a

Basic info.

Secondary strurture and sequence

mature sequence    star sequence
5'



3'
 GGA       -GA    CA   T  T        C     -C     - A A AA    -   AC
    AGAGGGT   GAAT  CAG GC GTTCTCCT TGGCA  GAAGG C G G  GCCT GCC  
    |||||||   ||||  ||| || |||||||| |||||  ||||| | | |  |||| |||   
    TCTCCCG   CTTA  GTC CG TAAGAGGA ACCGT  CTTCC G C C  CGGA CGG  
ATGG       ATA    CC   C  T        A     TC     C G - AC    T   TA

miRNA cluster info.

No miRNA locus in ± 10k bp interval.

miRNA syntenic block

No syntenic block.

Expression info.

Mature miRNA expression [+]

Reads per million (RPM)

star miRNA expression [+]

Reads per million (RPM)

Target gene info.[+]

Target gene ID psRNAtarget RNAhybrid PARE-Seq?

The first number (from 0-2) indicates the category of CleaveLand4 analysis result while the number in brackets displays the number of degradome libraries which verify the miRNA-target interaction. Click the number to download the selected figure of PARE-Seq reads distribution.

Seita.3G150400.1 1.5 NA NA
Seita.9G233700.1 1.5 NA NA

Mature miRNA conservation

?

Mature miRNA conservation

    Link

    Reference