Spo-MIR157a

Basic info.

Secondary strurture and sequence

mature sequence    star sequence
5'



3'
GG -A  AT  A     ---GC  T         -              -TGA   A        GT
  A  GA  GA GAGAC     TG TGACAGAAG ATAGAGAGCACAGA    TGA ATGCAGGG  
  |  ||  || |||||     || ||||||||| ||||||||||||||    ||| ||||||||   
  T  CT  CT CTCTG     AC ACTGTCTTC TATCTCTCGTGTTT    ACT TACGTCCT  
   CC  CT  A     ACCTC  T         G              CCCC   C        CA

miRNA cluster info.

No miRNA locus in ± 10k bp interval.

miRNA syntenic block

No syntenic block.

Expression info.

Mature miRNA expression [+]

Reads per million (RPM)

star miRNA expression [+]

Reads per million (RPM)

Target gene info.[+]

Target gene ID psRNAtarget RNAhybrid PARE-Seq?

The first number (from 0-2) indicates the category of CleaveLand4 analysis result while the number in brackets displays the number of degradome libraries which verify the miRNA-target interaction. Click the number to download the selected figure of PARE-Seq reads distribution.

Spipo10G0020600 1.5 1 NA
Spipo12G0064300 1.5 1 NA

Mature miRNA conservation

?

Mature miRNA conservation

    Link

    Reference