Spo-MIR160a

Basic info.

Secondary strurture and sequence

mature sequence    star sequence
5'



3'
  AAGGAAGGTGACATGGC      C       C          A   -    A C    CATG
                   CTGTGC TGGCTCC TGTATGCCAC CGC GTAG C AATC    
                   |||||| ||||||| |||||||||| ||| |||| | ||||     
                   GATACG ACCGAGG GCGTGCGGTG GCG CATC G TTAG    
CGCTCGCTCTCTCTCTCTA      A       A          G   T    - C    TGAG

miRNA cluster info.

No miRNA locus in ± 10k bp interval.

miRNA syntenic block

No syntenic block.

Expression info.

Mature miRNA expression [+]

Reads per million (RPM)

star miRNA expression [+]

Reads per million (RPM)

Target gene info.[+]

Target gene ID psRNAtarget RNAhybrid PARE-Seq?

The first number (from 0-2) indicates the category of CleaveLand4 analysis result while the number in brackets displays the number of degradome libraries which verify the miRNA-target interaction. Click the number to download the selected figure of PARE-Seq reads distribution.

Spipo0G0155300 0.0 0 NA
Spipo16G0055200 0.0 NA NA
Spipo9G0041600 0.5 0 NA
Spipo0G0098000 1.0 NA NA
Spipo31G0005500 1.5 1 NA

Mature miRNA conservation

?

Mature miRNA conservation

    Link

    Reference