Spo-MIR166c

Basic info.

Secondary strurture and sequence

mature sequence    star sequence
5'



3'
 TTTC  -G     A  T C        TT             -     --A  GAA
     TG  TTTGC GC G GAGGGATG  GTCTGGTTCGAAA CCATG   GA   
     ||  ||||| || | ||||||||  ||||||||||||| |||||   ||    
     AC  AGACG CG C CTCCTTAC  CGGACCAGGCTTT GGTGT   CT   
TCTCA  AA     C  T A        TT             T     GAC  AAA

miRNA cluster info.

No miRNA locus in ± 10k bp interval.

miRNA syntenic block

No syntenic block.

Expression info.

Mature miRNA expression [+]

Reads per million (RPM)

star miRNA expression [+]

Reads per million (RPM)

Target gene info.[+]

Target gene ID psRNAtarget RNAhybrid PARE-Seq?

The first number (from 0-2) indicates the category of CleaveLand4 analysis result while the number in brackets displays the number of degradome libraries which verify the miRNA-target interaction. Click the number to download the selected figure of PARE-Seq reads distribution.

Spipo1G0002900 1.0 NA NA
Spipo32G0009800 1.0 NA NA
Spipo5G0037000 1.0 NA NA

Mature miRNA conservation

?

Mature miRNA conservation

    Link

    Reference