Spo-MIR168a

Basic info.

• miRNA locus ID
• Spo-MIR168a

• miRNA locus accession
• PmiREN020150

• Organism
• Spirodela polyrhiza

• Genomic location
• Spo-pseudo0  998264  998403  +

• Comments
• A member of family MIR168

• Confidence level
• 

Secondary strurture and sequence

  TGCTGCTGG        A     C          T     A       CTCTCAC       G  TT  CCTC
           CTGTCTCT ATTCG TTGGTGCAGG CGGGA CGGGGGC       GGCGCTG CC  CC    
           |||||||| ||||| |||||||||| ||||| |||||||       ||||||| ||  ||     
           GACAGAGG TAAGT AACTACGTTC GCCCT GCCCCCG       CTGCGGC GG  GG    
ACTTGAGTGAA        C     C          C     C       ------C       -  -T  TCTT

• Get mature sequence
• Get star sequence
• Get miRNA stem-loop seqence
• Get miRNA stem-loop ± 20bp
• Get dot-bracket miRNA secondary structure
• Get miRNA stem-loop ± 500bp
• Get miRNA Promoter

miRNA cluster info.

• Cluster ID: 
• Chromosome: 
• Cluster start: 
• Cluster end: 

miRNA syntenic block

Expression info.

Mature miRNA expression [+]

star miRNA expression [+]

Target gene info.[+]

Link

• No link
• No link

Reference

• No reference