Spo-MIR168c

Basic info.

• miRNA locus ID
• Spo-MIR168c

• miRNA locus accession
• PmiREN020152

• Organism
• Spirodela polyrhiza

• Genomic location
• Spo-pseudo18  2177461  2177597  +

• Comments
• A member of family MIR168

• Confidence level
• 

Secondary strurture and sequence

  CTACCGGAGAG            C           C       T  CCCCCACCCCC         AT   GG
             ATCTCGAGTTCG TTGGTGCAGGT GGGAACC GC           TCCGCCGCC  GCC  
             |||||||||||| ||||||||||| ||||||| ||           |||||||||  |||  C
             TGGAGCTTAAGT AACCGCGTTCA CCCTTGG CG           AGGCGGCGG  CGG  
AGAGGCGGCGCTA            C           C       -  ---------CA         --   AG

• Get mature sequence
• Get star sequence
• Get miRNA stem-loop seqence
• Get miRNA stem-loop ± 20bp
• Get dot-bracket miRNA secondary structure
• Get miRNA stem-loop ± 500bp
• Get miRNA Promoter

miRNA cluster info.

• Cluster ID: 
• Chromosome: 
• Cluster start: 
• Cluster end: 

miRNA syntenic block

Expression info.

Mature miRNA expression [+]

star miRNA expression [+]

Target gene info.[+]

Link

• No link
• No link

Reference

• No reference