Spo-MIR168d

Basic info.

• miRNA locus ID
• Spo-MIR168d

• miRNA locus accession
• PmiREN020153

• Organism
• Spirodela polyrhiza

• Genomic location
• Spo-pseudo30  1210299  1210434  -

• Comments
• A member of family MIR168

• Confidence level
• 

Secondary strurture and sequence

  GGCCGCTCGCC T          C          T     A    GCCCCAC     CCCTCCC    ATG
             G CTCTGGTTCG TTGGTGCAGG CGGGA CGGA       TCCCC       AGGG   
             | |||||||||| |||||||||| ||||| ||||       |||||       ||||   C
             C GAGGCTAAGT AACTACGTTC GCCCT GCCT       AGGGG       TCCC   
CTGGAGTCGGAGG C          C          C     C    -------     --CACAC    CGA

• Get mature sequence
• Get star sequence
• Get miRNA stem-loop seqence
• Get miRNA stem-loop ± 20bp
• Get dot-bracket miRNA secondary structure
• Get miRNA stem-loop ± 500bp
• Get miRNA Promoter

miRNA cluster info.

• Cluster ID: 
• Chromosome: 
• Cluster start: 
• Cluster end: 

miRNA syntenic block

Expression info.

Mature miRNA expression [+]

star miRNA expression [+]

Target gene info.[+]

Link

• No link
• No link

Reference

• No reference