Spo-MIR390

Basic info.

• miRNA locus ID
• Spo-MIR390

• miRNA locus accession
• PmiREN020165

• Organism
• Spirodela polyrhiza

• Genomic location
• Spo-pseudo23  2571389  2571514  +

• Comments
• A member of family MIR390

• Confidence level
• 

Secondary strurture and sequence

  GAA           T    A          G           GGG  TTACG        TGC
     GGCAGGGAGAA CCGT AAGCTCAGGA GGATAGCGCCA   GC     GGAGGGAG   
     ||||||||||| |||| |||||||||| |||||||||||   ||     ||||||||   C
     TCGTTCCTCTT GGTA TTTGAGTCCT TCTATCGCGGT   CG     CCTCCCTT   
AGCCG           C    G          A           -AA  --TCG        GAG

• Get mature sequence
• Get star sequence
• Get miRNA stem-loop seqence
• Get miRNA stem-loop ± 20bp
• Get dot-bracket miRNA secondary structure
• Get miRNA stem-loop ± 500bp
• Get miRNA Promoter

miRNA cluster info.

• Cluster ID: 
• Chromosome: 
• Cluster start: 
• Cluster end: 

miRNA syntenic block

Expression info.

Mature miRNA expression [+]

star miRNA expression [+]

Target gene info.[+]

Link

• No link
• No link

Reference

• No reference