Spo-MIR396e

Basic info.

Secondary strurture and sequence

mature sequence    star sequence
5'



3'
  AA     -C        ATC            C      G    AC    CT
 G  TGGTG  TCTCTGTA   TTCCACAGCTTT TTGAAC GCGA  GGAG  
 |  |||||  ||||||||   |||||||||||| |||||| ||||  ||||  C
 C  ATCAT  AGGGACAT   AGGGTGTCGAAG AACTTG CGTT  TCTC  
G GC     AT        CAA            T      A    GT    TT

miRNA cluster info.

No miRNA locus in ± 10k bp interval.

miRNA syntenic block

No syntenic block.

Expression info.

Mature miRNA expression [+]

Reads per million (RPM)

star miRNA expression [+]

Reads per million (RPM)

Target gene info.[+]

Target gene ID psRNAtarget RNAhybrid PARE-Seq?

The first number (from 0-2) indicates the category of CleaveLand4 analysis result while the number in brackets displays the number of degradome libraries which verify the miRNA-target interaction. Click the number to download the selected figure of PARE-Seq reads distribution.

Spipo7G0055700 2.0 NA NA

Mature miRNA conservation

?

Mature miRNA conservation

    Link

    Reference