Spo-MIR396f

Basic info.

Secondary strurture and sequence

mature sequence    star sequence
5'



3'
   GA             CC            T              ATGT    CA  GA  G  GC
     CGAACCCCTTCAT  CTTTTCCACGGC TTCTTGAACTTTCT    CGCC  GA  GT GC  
     |||||||||||||  |||||||||||| ||||||||||||||    ||||  ||  || ||   
     GTTTGGGGAGGTA  GAAAGGGTGTCG AAGGACTTGAAAGA    GCGG  CT  CG CG  
CTGTG             -C            T              -GGT    --  -A  A  GC

miRNA cluster info.

No miRNA locus in ± 10k bp interval.

miRNA syntenic block

No syntenic block.

Expression info.

Mature miRNA expression [+]

Reads per million (RPM)

star miRNA expression [+]

Reads per million (RPM)

Target gene info.[+]

Target gene ID psRNAtarget RNAhybrid PARE-Seq?

The first number (from 0-2) indicates the category of CleaveLand4 analysis result while the number in brackets displays the number of degradome libraries which verify the miRNA-target interaction. Click the number to download the selected figure of PARE-Seq reads distribution.

Spipo1G0024400 2.0 0 NA

Mature miRNA conservation

?

Mature miRNA conservation

    Link

    Reference