Zos-MIR159

Basic info.

Secondary strurture and sequence

mature sequence    star sequence
5'



3'
   TTT     TTT    GA            GAT         AT       G T    -   TT  G  G    C     G TC    T     A     TAGTAGATTAAA   AT
      GAAGG   TTGG  GTAGAGCTTCTT   GTCCAAACG  GATCTTG A GAGC AGA  CA CT CTGG TTATG A  CCAC GTCCT TTCCA            TCG  
      |||||   ||||  ||||||||||||   |||||||||  ||||||| | |||| |||  || || |||| ||||| |  |||| ||||| |||||            |||   
      TTTCC   AACT  CATCTCGAGGGA   TAGGTTTGT  CTAGAGT T CTCG TCT  GT GA GACC AATAC T  GGTG TAGGA AGGGT            AGC  
TTTGTT     TCT    -A            AGT         GT       G -    A   -C  A  G    T     G TC    T     C     TTTTGGTACCTA   TA

miRNA cluster info.

No miRNA locus in ± 10k bp interval.

miRNA syntenic block

No syntenic block.

Expression info.

Mature miRNA expression [+]

Reads per million (RPM)

star miRNA expression [+]

Reads per million (RPM)

Target gene info.[+]

Target gene ID psRNAtarget RNAhybrid PARE-Seq?

The first number (from 0-2) indicates the category of CleaveLand4 analysis result while the number in brackets displays the number of degradome libraries which verify the miRNA-target interaction. Click the number to download the selected figure of PARE-Seq reads distribution.

Zosma185g00430.1 1.5 2 NA
Zosma1g01570.1 1.5 1 NA
Zosma38g00920.1 2.0 1 NA
Zosma38g00960.1 2.0 1 NA

Mature miRNA conservation

?

Mature miRNA conservation

    Link

    Reference