Zos-MIR172e

Basic info.

Secondary strurture and sequence

mature sequence    star sequence
5'



3'
     T      AGT     T          T         A   -A    TTTT
   GC AGCTAC   TTTCC ATGCGGCATC TCAAGATTC CAA  GGTA    
   || ||||||   ||||| |||||||||| ||||||||| |||  ||||     
   CG TCGATG   AAAGG TACGTCGTAG AGTTCTAAG GTT  CCAT    
GTC  -      AAT     T          T         A   AA    TGTG

miRNA cluster info.

No miRNA locus in ± 10k bp interval.

miRNA syntenic block

No syntenic block.

Expression info.

Mature miRNA expression [+]

Reads per million (RPM)

star miRNA expression [+]

Reads per million (RPM)

Target gene info.[+]

Target gene ID psRNAtarget RNAhybrid PARE-Seq?

The first number (from 0-2) indicates the category of CleaveLand4 analysis result while the number in brackets displays the number of degradome libraries which verify the miRNA-target interaction. Click the number to download the selected figure of PARE-Seq reads distribution.

Zosma152g00050.1 0.5 NA NA
Zosma248g00430.1 0.5 NA NA
Zosma123g00770.1 1.0 0 NA
Zosma142g00200.1 1.5 NA NA
Zosma214g00080.1 1.5 NA NA

Mature miRNA conservation

?

Mature miRNA conservation

    Link

    Reference