Zos-MIR172f

Basic info.

Secondary strurture and sequence

mature sequence    star sequence
5'



3'
  AGC        CTT  A                     A   GTA        T    TAGATT
     AGTTACTT   GC GGTGCAGCATTATTGAGATTC CAT   TTTTATAT CCCA      
     ||||||||   || ||||||||||||||||||||| |||   |||||||| ||||       
     TCGATGAG   CG CTACGTCGTAGTAGTTCTAAG GTA   AAGATATA GGGT      
GCCCT        TAC  A                     A   ---        T    CGGTGG

miRNA cluster info.

No miRNA locus in ± 10k bp interval.

miRNA syntenic block

No syntenic block.

Expression info.

Mature miRNA expression [+]

Reads per million (RPM)

star miRNA expression [+]

Reads per million (RPM)

Target gene info.[+]

Target gene ID psRNAtarget RNAhybrid PARE-Seq?

The first number (from 0-2) indicates the category of CleaveLand4 analysis result while the number in brackets displays the number of degradome libraries which verify the miRNA-target interaction. Click the number to download the selected figure of PARE-Seq reads distribution.

Zosma152g00050.1 0.5 NA NA
Zosma248g00430.1 0.5 NA NA
Zosma123g00770.1 1.0 0 NA
Zosma142g00200.1 1.5 NA NA
Zosma214g00080.1 1.5 NA NA

Mature miRNA conservation

?

Mature miRNA conservation

    Link

    Reference