Zos-MIR390a

Basic info.

• miRNA locus ID
• Zos-MIR390a

• miRNA locus accession
• PmiREN024311

• Organism
• Zostera marina

• Genomic location
• Zos-scaffold_172  78027  78170  -

• Comments
• A member of family MIR390

• Confidence level
• 

Secondary strurture and sequence

   CT    T     TAT  TTA          G         C    -CTCATG   -T     TTT   TAAT
     AGTA AGAAG   CC   AAGCTCAGGA GGATAGCGC ATGG       GGT  TTGAA   GAA    
     |||| |||||   ||   |||||||||| ||||||||| ||||       |||  |||||   |||     
     TCAT TCTTC   GG   TTTGAGTCCT TCTATCGCG TACC       TCA  AGCTT   CTT    
TTTCT    -     TTC  TAC          A         T    ATCATCA   TT     CTC   CTTT

• Get mature sequence
• Get star sequence
• Get miRNA stem-loop seqence
• Get miRNA stem-loop ± 20bp
• Get dot-bracket miRNA secondary structure
• Get miRNA stem-loop ± 500bp
• Get miRNA Promoter

miRNA cluster info.

• Cluster ID: 
• Chromosome: 
• Cluster start: 
• Cluster end: 

miRNA syntenic block

Expression info.

Mature miRNA expression [+]

star miRNA expression [+]

Target gene info.[+]

Link

• No link
• No link

Reference

• No reference