Zos-MIR396b

Basic info.

Secondary strurture and sequence

mature sequence    star sequence
5'



3'
   AAC     T      TC        C   T               ---CAT     --   ---        -G   GT
      CAACC CTTCAT  CTTTTCCA AGC TTCTTGAACTTTTTT      ATTCC  CAT   TTCAATTT  ATG  
      ||||| ||||||  |||||||| ||| |||||||||||||||      |||||  |||   ||||||||  |||  G
      GTTGG GGAGTA  GAAAAGGT TCG AAGGACTTGAAAAAA      TAAGG  GTA   AAGTTAAG  TAC  
TAAGAG     T      -T        A   T               ATTCAT     AG   TAA        AG   TG

miRNA cluster info.

No miRNA locus in ± 10k bp interval.

miRNA syntenic block

No syntenic block.

Expression info.

Mature miRNA expression [+]

Reads per million (RPM)

star miRNA expression [+]

Reads per million (RPM)

Target gene info.[+]

Target gene ID psRNAtarget RNAhybrid PARE-Seq?

The first number (from 0-2) indicates the category of CleaveLand4 analysis result while the number in brackets displays the number of degradome libraries which verify the miRNA-target interaction. Click the number to download the selected figure of PARE-Seq reads distribution.

Zosma29g01130.1 1.5 NA NA
Zosma52g01270.1 2.0 NA NA

Mature miRNA conservation

?

Mature miRNA conservation

    Link

    Reference