Bol-MIR168b

Basic info.

• miRNA locus ID
• Bol-MIR168b

• miRNA locus accession
• PmiREN002341

• Organism
• Brassica oleracea

• Genomic location
• Bol-C07  41430765  41430906  +

• Comments
• A member of family MIR168

• Confidence level
• 

Secondary strurture and sequence

AA       -  -     G      C          T     -      --    G   C     --CT    CT
  TCACCGT GG GGCTC GATTCG TTGGTGCAGG CGGGA CTGATA  TGCT ACA AACCA    GGTG  
  ||||||| || ||||| |||||| |||||||||| ||||| ||||||  |||| ||| |||||    ||||   
  AGTGGTA CC CCGAG CTAAGT AACTACGTTC GCCCT GGTTAT  ACGA TGT TTGGT    CCAT  
AA       A  T     G      T          C     C      GG    G   -     TATT    TT

• Get mature sequence
• Get star sequence
• Get miRNA stem-loop seqence
• Get miRNA stem-loop ± 20bp
• Get dot-bracket miRNA secondary structure
• Get miRNA stem-loop ± 500bp
• Get miRNA Promoter

miRNA cluster info.

• Cluster ID: 
• Chromosome: 
• Cluster start: 
• Cluster end: 

miRNA syntenic block

Expression info.

Mature miRNA expression [+]

star miRNA expression [+]

Target gene info.[+]

Link

• No link
• No link

Reference

• >Identification and characterization of microRNAs in oilseed rape (Brassica napus) responsive to infection with the pathogenic fungus Verticillium longisporum using Brassica AA (Brassica rapa) and CC (Brassica oleracea) as reference genomes. New Phytol, 2014