Bol-MIR390a

Basic info.

• miRNA locus ID
• Bol-MIR390a

• miRNA locus accession
• PmiREN002354

• Organism
• Brassica oleracea

• Genomic location
• Bol-C03  10279836  10279950  +

• Comments
• A member of family MIR390

• Confidence level
• 

Secondary strurture and sequence

   AA    C      A  T  A          G           TC  C   ATCTCAT
     AGTA AGAAGA TC GT AAGCTCAGGA GGATAGCGCCA  AT ATC       
     |||| |||||| || || |||||||||| |||||||||||  || |||        
     TCAT TCTTCT GG TA TTTGAGTCCT CCTGTCGCGGT  TA TAG       
TAACA    -      C  T  C          A           TT  -   CTAAACT

• Get mature sequence
• Get star sequence
• Get miRNA stem-loop seqence
• Get miRNA stem-loop ± 20bp
• Get dot-bracket miRNA secondary structure
• Get miRNA stem-loop ± 500bp
• Get miRNA Promoter

miRNA cluster info.

• Cluster ID: 
• Chromosome: 
• Cluster start: 
• Cluster end: 

miRNA syntenic block

Expression info.

Mature miRNA expression [+]

star miRNA expression [+]

Target gene info.[+]

Link

• No link
• No link

Reference

• >Quantitative expression of microRNAs in Brassica oleracea infected with Xanthomonas campestris pv. campestris. Mol Biol Rep, 2019